Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015865577.1_cds_XP_016432429.1_28678
CDS Infomation

[gene=LOC107759071] [db_xref=GeneID:107759071] [protein=protein indeterminate-domain 5, chloroplastic-like] [protein_id=XP_016432429.1] [location=complement(join(90543..91716,93283..93679,93963..94128))] [gbkey=CDS]
Sequence

ATGGCTGCAGGGCCTTCATCAGCTGTGTTTCTTGCAATGAGAGAAGAAGAACAAAACCAA
CAAATGAAACAACAACAACAACAACAACAAGAACTTCTCATTCAGCAGCAACCACAACAA
CAGCAAGCACCACAAAAGAAGAGAAGAAATCAGCCTGGCACACCAAATCCAGATGCAGAG
ATAATAGCACTATCACCCAAGACCCTAATGGCAACAAACAGGTTCGTATGTGAGGTATGC
AACAAAGGTTTTCAAAGGGAACAAAATCTACAGCTACACAGAAGAGGACACAATTTGCCT
TGGAAGCTAAAGCAGAAGAGTACAAAAGAAGTGAAGCGCAAAGTTTATTTGTGCCCTGAG
CCCACATGTGTTCACCATGACCCTTCTCGAGCCCTTGGCGATCTCACTGGTATTAAGAAA
CATTACTCCAGAAAACATGGTGAGAAGAAATATAAGTGCGAAAAATGTTCCAAAAAATAT
GCTGTCCAGTCTGATTGGAAAGCTCATACTAAAACCTGTGGTACTCGCGAATACAAATGT
GATTGTGGCACCCTTTTCTCAAGGCGTGATAGTTTCATCACCCACAGAGCCTTTTGTGAT
GCATTGGCACAAGAAAGTGCGAGAAATCCACCAAGCTTGAGCAGCATTGGGAGTCATTTA
TATGGAAGTAACAACAACATGAGTTTAGGCCACTCAAAAATGGGTTCCCAAATTTCAGAT
CATCAACACCATTCTTCTAACTCCACCGATATACTGCATTTTGGCAGCAACATCAAAACT
AGTACTGGCCAATTCGATCACAACAACCTTATGGGAACATCAATTGGCTCAGCTTTCCGT
CCTTCGACGTCCTTCTTTCTTCCAGCTGATCAATCAAATCATCAAGATTACGGGGCAAAT
AAGCCGTCAATCCATGGCTTAATGCAACTTCCTGATCTTCACAACAATGGAAATAATAAC
AGCTCCCCTTCTGTGGCTAGTATGTTCAACCTAAATTTCTTCCAAAATAGCAACAACAAT
AGTGAAAATGTTGGAAATAGCAATATTTCTGGAGGAGGTGGTGGTCTATTGCTTCCGAGT
CATCAGTTCAGTAACAGCAGTGGTGACGGGTCGAATAATTCATCCAACATGTTCTCAGCT
GGTAGCCTTCTTGGTACTGATCATCACATAAGTTCCTCATCAATCCCTTCTCTCTACGGT
AACAACCTTAATAATAATAACAACACTGCTTCACCAATGTCTGCCACCGCGCTCCTCCAG
AAAGCAGCTCAAATGGGTTCCACAACAAGCAACAACAGCAGTGCCTCCTTGCTCAAAGCC
TTTGGTTCATCCTCTAGCGCCACCAAATCCGATATTCATCCGCCGCCACCTGTCAACTTT
GGCAACGTTGTTTATGGCGACCCTTTAAGCGAGAATCATCTTCATGACCTAGTTGTAAAT
GCTTATGGTAATAATGATCAAAATCAACAGAACAACTACGGGAATAGCTTTGAGCAGCAG
CAGCCACCACAGAAGAAGCAAATGCTTAATAACTTTTCAATGGAAAATATGGGAACTGAG
CAAGCTAATAGGTTGACAAGGGATTTTCTTGGAGTTGGGGAAATAGTAAGGAGCATGAGT
GGAGGATTTGGAAGCAGCCACAGAGATCACCAGCAGATGAGCACATTGGATTCAAAAGCT
GTGCCGCCACCGCAAAGCCATCATCAGTCTTTTGGAGGTGCTGGAAATTTTCAGTGA

Peptide Sequence

PEP ID

XP_016432429.1
PEP Infomation

PREDICTED: protein indeterminate-domain 5, chloroplastic-like [Nicotiana tabacum]
Sequence

MAAGPSSAVFLAMREEEQNQQMKQQQQQQQELLIQQQPQQQQAPQKKRRNQPGTPNPDAE
IIALSPKTLMATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEVKRKVYLCPE
PTCVHHDPSRALGDLTGIKKHYSRKHGEKKYKCEKCSKKYAVQSDWKAHTKTCGTREYKC
DCGTLFSRRDSFITHRAFCDALAQESARNPPSLSSIGSHLYGSNNNMSLGHSKMGSQISD
HQHHSSNSTDILHFGSNIKTSTGQFDHNNLMGTSIGSAFRPSTSFFLPADQSNHQDYGAN
KPSIHGLMQLPDLHNNGNNNSSPSVASMFNLNFFQNSNNNSENVGNSNISGGGGGLLLPS
HQFSNSSGDGSNNSSNMFSAGSLLGTDHHISSSSIPSLYGNNLNNNNNTASPMSATALLQ
KAAQMGSTTSNNSSASLLKAFGSSSSATKSDIHPPPPVNFGNVVYGDPLSENHLHDLVVN
AYGNNDQNQQNNYGNSFEQQQPPQKKQMLNNFSMENMGTEQANRLTRDFLGVGEIVRSMS
GGFGSSHRDHQQMSTLDSKAVPPPQSHHQSFGGAGNFQ

Transcript Sequence

Gene sequence data has not been registered.